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Tomasz Kościółek

Type: Person
First name: Tomasz
Last name: Kościółek
Publications count: 10

Publications

The impact of maternal microbial transfer on the infant gut microbiome after cesarean delivery: a systematic review
Printed Journal article

Authors: Jan Jurgiel, Tomasz Gromowski, Joanna Król, Dorota Bomba-Opoń, Tomasz Kościółek, Mirosław Wielgoś

Research groups: Structural and Functional Genomics Group

Effects of data transformation and model selection on feature importance in microbiome classification data
Printed Journal article

Authors: Zuzanna Karwowska, Oliver Aasmets, Estonian Biobank research team, Tomasz Kościółek, Elin Org

Research groups: Structural and Functional Genomics Group

Explainable Artificial Intelligence for Bioactivity Prediction: Unveiling the Challenges with Curated CDK2/CDK4/CDK6 Breast Cancer Dataset
Printed Conference manuscript

Authors: Adam Sułek, Jakub Klimczak, Jakub Jonczyk, Tomasz Kościółek, Tomasz Danel, Barbara Pucelik

Research groups: Structural and Functional Genomics Group

Gut microbiome and blood biomarkers reveal differential responses to aerobic and anaerobic exercise in collegiate men of diverse training backgrounds
Printed Journal article

Authors: Kinga Humińska-Lisowska, Monika Michałowska-Sawczyn, Tomasz Kościółek, Paweł P. Łabaj, Andrzej Kochanowicz, Jan Mieszkowski, Patrizia Proia, Paweł Cięszczyk, Kinga Zielińska

Research groups: Structural and Functional Genomics Group

Gut microbiome and cognitive function in the Hispanic Community Health Study/Study of Latinos
Printed Journal article

Authors: Natalia Palacios, Scott Gordon, Tao Wang, Robert Burk, Qibin Qi, Curtis Huttenhower, Hector M Gonzalez, Rob Knight, Charles De Carli, Marta Daviglus, Melissa Lamar, Gregory Telavera, Wassim Tarraf, Tomasz Kościółek, Jianwen Cai, Robert C Kaplan

Research groups: Structural and Functional Genomics Group

High-altitude mountaineering induces adaptive gut microbiome shifts associated with dietary intake and performance markers
Printed Journal article

Authors: Ewa Karpęcka-Gałka, Kinga Zielińska, Barbara Frączek, Paweł P. Łabaj, Tomasz Kościółek, Kinga Humińska-Lisowska

Research groups: Structural and Functional Genomics Group

Large protein databases reveal structural complementarity and functional locality
Printed Journal article

Authors: Paweł Szczerbiak, Lukasz M. Szydlowski, Witold Wydmański, P Douglas Renfrew, Julia Koehler Leman, Tomasz Kościółek

Research groups: Structural and Functional Genomics Group

SARS-CoV-2 infectivity can be modulated through bacterial grooming of the glycocalyx
Printed Journal article

Authors: Cameron Martino, Benjamin P. Kellman, Daniel R. Sandoval, Thomas Mandel Clausen, Robert Cooper, Alhosna Benjdia, Feryel Soualmia, Alex E. Clark, Aaron F. Garretson, Clarisse A. Marotz, Se Jin Song, Stephen Wandro, Livia S. Zaramela, Rodolfo A. Salido, Erick Armingol QiyunZhu, Yoshiki Vázquez-Baeza, Daniel McDonald, James T. Sorrentino, Bryn Taylor, Pedro Belda-Ferre, Promi Das, Farhana Ali, Chenguang Liang, Yujie Zhang, Luca Schifanella, Alice Covizzi, Alessia Lai, Agostino Riva, Christopher Basting, Courtney AnnBroedlow, Aki S. Havulinna, Pekka Jousilahti, Mehrbod Estaki, Tomasz Kościółek, Rayus Kuplicki, Teresa A. Victor, Martin P. Paulus, Kristen E. Savage, Jennifer L. Benbow, Emma S. Spielfogel, Cheryl A. M. Anderson, Maria Elena Martinez, James V. Lacey, Shi Huang Jr, Laxmi Parida NiinaHaiminen, Ho-Cheol Kim, Jack A. Gilbert, Daniel A. Sweeney, Sarah M. Allard, Austin D. Swafford, Susan Cheng, Teemu Niiranen MichaelInoyue, Mohit Jain, Veikko Salomaa, Karsten Zengler, Nichole R. Klatt, Jeff Hasty, Olivier Berteau, Aaron F. Carlin, Jeffrey D. Esko, Nathan E. Lewis, Rob Knight

Research groups: Structural and Functional Genomics Group

Adaptation to space conditions of novel bacterial species isolated from the International Space Station revealed by functional gene annotations and comparative genome analysis
Printed Journal article

Authors: Lukasz M. Szydlowski, Alper A. Bulbul, Anna C. Simpson, Deniz E. Kaya, Nitin K. Singh, Ugur O. Sezerman, Paweł P. Łabaj, Tomasz Kościółek, Kasthuri J. Venkateswaran

Research groups: Structural and Functional Genomics Group

Targeted isolation of Methanobrevibacter strains from fecal samples expands the cultivated human archaeome
Printed Journal article

Authors: Duller S, Vrbancic S, Lukasz M. Szydlowski, Mahnert A, Blohs M, Predl M, Kumpitsch C, Zrim V, Högenauer C, Tomasz Kościółek, Schmitz RA

Research groups: Structural and Functional Genomics Group