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Sabina Lichołai

Type: Person
First name: Sabina
Last name: Lichołai
Publications count: 11

Publications

Accelerating Cloud-Based Transcriptomics: Performance Analysis and Optimization of the STAR Aligner Workflow
Printed Conference manuscript

Authors: Piotr Kica, Sabina Lichołai, Michał Orzechowski, Maciej Malawski

Research groups: Extreme-Scale Data and Computing, Scientific Programmers

Analysis of Index Access Pattern in STAR RNA-seq Aligner
Printed Conference abstract

Authors: Jan Meizner, Piotr Kica, Sabina Lichołai, Maciej Malawski

Research groups: Extreme-Scale Data and Computing

Role of miR-21-5p in the pathogenesis of abdominal aortic aneurysm regarding the Th17 pathway
Printed Journal article

Authors: Dorota Studzińska, Sabina Lichołai, Kamil Polok, Hanna Plutecka, Piotr Kica, Piotr Grazda, Maciej Chwała, Marek Sanak, Wojciech Szczeklik

Research groups: Extreme-Scale Data and Computing

Optimizing STAR Aligner for High Throughput Computing in the Cloud
Printed Conference manuscript

Authors: Piotr Kica, Sabina Lichołai, Michał Orzechowski, Maciej Malawski

Research groups: Extreme-Scale Data and Computing, Scientific Programmers

Comprehensive Analysis of Circular RNAs in Endothelial Cells
Printed Journal article

Authors: Sabina Lichołai, D. Studzińska, H. Plutecka, Tomasz Gubala, M. Sanak

Research groups: Scientific Programmers, Extreme-Scale Data and Computing

GraphTar: applying word2vec and graph neural networks to miRNA target prediction
Printed Journal article

Authors: Jan Przybyszewski, Maciej Malawski, Sabina Lichołai

Research groups: Extreme-Scale Data and Computing

Novel Approaches Toward Scalable Composable Workflows in Hyper-Heterogeneous Computing Environments
Printed Conference manuscript

Authors: Jonathan Bader, Jim Belak, Matthew Bement, Matthew Berry, Robert Carson, Daniela Cassol, Stephen Chan, John Coleman, Kastan Day, Alejandro Duque, Kjiersten Fagnan, Jeff Froula, Shantenu Jha, Daniel S. Katz, Piotr Kica, Volodymyr Kindratenko, Edward Kirton, Ramani Kothadia, Daniel Laney, Fabian Lehmann, Ulf Leser, Sabina Lichołai, Maciej Malawski, Mario Melara, Elais Player, Matt Rolchigo, Setareh Sarrafan, Seung-Jin Sul, Abdullah Syed, Lauritz Thamsen, Mikhail Titov, Matteo Turilli, Silvina Caino-Lores, Anirban Mandal

Research groups: Extreme-Scale Data and Computing

Improvements in Quality Control and Library Preparation for Targeted Sequencing Allowed Detection of Potentially Pathogenic Alterations in Circulating Cell-Free DNA Derived from Plasma of Brain Tumor Patients
Printed Journal article

Authors: Paulina Szadkowska, Adria-Jaume Roura, Bartosz Wojtas, Kamil Wojnicki, Sabina Lichołai, Tomasz Waller, Tomasz Gubala, Kacper Zukowski, Michal Karpeta, Kinga Wilkus, Wojciech Kaspera, Sergiusz Nawrocki, Bozena Kaminska

Research groups: Scientific Programmers, other

Personalized risk evaluation for outcoma prediction in ANCA associated vasculitis (AAV) using latent class analysis and machine learning
Printed Conference manuscript

Authors: K. Wójcik, A. Ćmiel, T. Satława, Sabina Lichołai, K. Wawrzycka-Adamczyk, G. Biedroń, A. Masiak, Z. Zdrojewski, H. Storoniak, B. Bułło-Piontecka, A. Dębska-Ślizień, R. Jeleniewicz, M. Majdan, K. Jakuszko, H. Augustyniak-Bartosik, M. Krajewska, I. Brzosko, M. Brzosko, J. Kur-Zalewska, W. Tłustochowicz, M. Madej, A. Hawrot-Kawecka, E. Kucharz, P. Głuszko, M. Wisłowska, J. Miłkowska-Dymanowska, A. Lewandowska-Polak, J. Makowska, J. Zalewska, Tomasz Gubala, Maciej Malawski, J. Musiał

Research groups: Extreme-Scale Data and Computing, other

Subgrouping and personalized risk evaluation for outcome prediction in ANCA associated vasculitis (AAV)
Printed Conference manuscript

Authors: K. Wójcik, A. Ćmiel, T. Satława, Sabina Lichołai, K. Wawrzycka-Adamczyk, G. Biedroń, A. Masiak, Z. Zdrojewski, H. Storoniak, B. Bułło-Piontecka, A. Dębska-Ślizień, R. Jeleniewicz, M. Majdan, K. Jakuszko, H. Augustyniak-Bartosik, M. Krajewska, I. Brzosko, M. Brzosko, J. Kur-Zalewska, W. Tłustochowicz, M. Madej, A. Hawrot-Kawecka, E. Kucharz, P. Głuszko, M. Wisłowska, J. Miłkowska-Dymanowska, A. Lewandowska-Polak, J. Makowska, J. Zalewska, Tomasz Gubala, Maciej Malawski, J. Musiał

Research groups: Extreme-Scale Data and Computing, other

MiR-191 as a Key Molecule in Aneurysmal Aortic Remodeling
Printed Journal article

Authors: Sabina Lichołai, Dorota Studzińska, Hanna Plutecka, Tomasz Gubala, Wojciech Szczeklik, Marek Sanak

Research groups: Scientific Programmers, other