Publications

Displaying items 121-135 of 236 in total
SARS-CoV-2 infectivity can be modulated through bacterial grooming of the glycocalyx
Printed Journal article

Authors: Cameron Martino, Benjamin P. Kellman, Daniel R. Sandoval, Thomas Mandel Clausen, Robert Cooper, Alhosna Benjdia, Feryel Soualmia, Alex E. Clark, Aaron F. Garretson, Clarisse A. Marotz, Se Jin Song, Stephen Wandro, Livia S. Zaramela, Rodolfo A. Salido, Erick Armingol QiyunZhu, Yoshiki Vázquez-Baeza, Daniel McDonald, James T. Sorrentino, Bryn Taylor, Pedro Belda-Ferre, Promi Das, Farhana Ali, Chenguang Liang, Yujie Zhang, Luca Schifanella, Alice Covizzi, Alessia Lai, Agostino Riva, Christopher Basting, Courtney AnnBroedlow, Aki S. Havulinna, Pekka Jousilahti, Mehrbod Estaki, Tomasz Kościółek, Rayus Kuplicki, Teresa A. Victor, Martin P. Paulus, Kristen E. Savage, Jennifer L. Benbow, Emma S. Spielfogel, Cheryl A. M. Anderson, Maria Elena Martinez, James V. Lacey, Shi Huang Jr, Laxmi Parida NiinaHaiminen, Ho-Cheol Kim, Jack A. Gilbert, Daniel A. Sweeney, Sarah M. Allard, Austin D. Swafford, Susan Cheng, Teemu Niiranen MichaelInoyue, Mohit Jain, Veikko Salomaa, Karsten Zengler, Nichole R. Klatt, Jeff Hasty, Olivier Berteau, Aaron F. Carlin, Jeffrey D. Esko, Nathan E. Lewis, Rob Knight

Research groups: Structural and Functional Genomics Group

Effects of data transformation and model selection on feature importance in microbiome classification data
Printed Journal article

Authors: Zuzanna Karwowska, Oliver Aasmets, Estonian Biobank research team, Tomasz Kościółek, Elin Org

Research groups: Structural and Functional Genomics Group

Multi-Center Fetal Brain Tissue Annotation (FeTA) Challenge 2022 Results
Printed Journal article

Authors: Kelly Payette, Céline Steger, Roxane Licandro, Priscille de Dumast, Hongwei Bran Li, Matthew Barkovich, Liu Li, Maik Dannecker, Chen Chen, Cheng Ouyang, Niccolò McConnell, Alina Miron, Yongmin Li, Alena Uus, Irina Grigorescu, Paula Ramirez Gilliland, Md Mahfuzur Rahman Siddiquee, Daguang Xu, Andriy Myronenko, Haoyu Wang, Ziyan Huang, Jin Ye, Mireia Alenyà, Valentin Comte, Oscar Camara, Jean-Baptiste Masson, Astrid Nilsson, Charlotte Godard, Moona Mazher, Abdul Qayyum, Yibo Gao, Hangqi Zhou, Shangqi Gao, Jia Fu, Guiming Dong, Guotai Wang, ZunHyan Rieu, HyeonSik Yang, Minwoo Lee, Szymon Płotka, Michal K. Grzeszczyk, Arkadiusz Sitek, Luisa Vargas Daza, Santiago Usma, Pablo Arbelaez, Wenying Lu, Wenhao Zhang, Jing Liang, Romain Valabregue, Anand A. Joshi, Krishna N. Nayak, Richard M. Leahy, Luca Wilhelmi, Aline Dändliker, Hui Ji, Antonio G. Gennari, Anton Jakovčić, Melita Klaić, Ana Adžić, Pavel Marković, Gracia Grabarić, Gregor Kasprian, Gregor Dovjak, Milan Rados, Lana Vasung, Meritxell Bach Cuadra, Andras Jakab

Research groups: Medical Imaging and Robotics

Transcriptomic profiling of “brain-eating amoeba” Naegleria fowleri infection in mice: the host and the protozoa perspectives
Printed Journal article

Authors: V. Guerlais, N. Allouch, E. A. Moseman, Alicja W. Wojciechowska, Jakub W. Wojciechowski, I Marcelino

Research groups: Structural and Functional Genomics Group

Refining antimicrobial photodynamic therapy: effect of charge distribution and central metal ion in fluorinated porphyrins on effective control of planktonic and biofilm bacterial forms
Printed Journal article

Authors: Barbara Pucelik, Agata Barzowska, Adam Sułek, Mateusz Werłos, Janusz M. Dąbrowski

Research groups: Structural and Functional Genomics Group

Placental Vessel Segmentation and Registration in Fetoscopy: Literature Review and MICCAI FetReg2021 Challenge Findings (old title: A Challenge on Placental Vessel Segmentation and Registration in Fetoscopy)
Printed Journal article

Authors: Szymon Płotka, Aneta Lisowska, Arkadiusz Sitek, ...

Research groups: Medical Imaging and Robotics

High performance computing requirements for the calculation of a morphology model of the human whole brain at the nanoscale
Printed Conference manuscript

Authors: Wieslaw L. Nowiński

Research groups: Senior Researchers

Impact of the pre-processing and balancing of EEG data on the performance of graph neural network for epileptic seizure classification
Printed Conference manuscript

Authors: Szymon Mazurek, Rosmary Blanco, Jan K. Argasiński, Joan Falco Roget, Alessandro Crimi

Research groups: Computational Neuroscience

Novel Approaches Toward Scalable Composable Workflows in Hyper-Heterogeneous Computing Environments
Printed Conference manuscript

Authors: Jonathan Bader, Jim Belak, Matthew Bement, Matthew Berry, Robert Carson, Daniela Cassol, Stephen Chan, John Coleman, Kastan Day, Alejandro Duque, Kjiersten Fagnan, Jeff Froula, Shantenu Jha, Daniel S. Katz, Piotr Kica, Volodymyr Kindratenko, Edward Kirton, Ramani Kothadia, Daniel Laney, Fabian Lehmann, Ulf Leser, Sabina Lichołai, Maciej Malawski, Mario Melara, Elais Player, Matt Rolchigo, Setareh Sarrafan, Seung-Jin Sul, Abdullah Syed, Lauritz Thamsen, Mikhail Titov, Matteo Turilli, Silvina Caino-Lores, Anirban Mandal

Research groups: Extreme-Scale Data and Computing

Performing Tasks in Virtual Reality. Interplay between Realism and Visual Imagery
Printed Conference manuscript

Authors: Natalia Lipp, Paweł Strojny, Agnieszka Strojny, Sławomir Śpiewak, Jan K. Argasiński, Przemysław Korzeniowski

Research groups: Medical Imaging and Robotics, Computational Neuroscience

Are You Aroused Enough to See the Difference? The Role of Physiological Arousal in Perceiving Realism of Virtual Scene
Printed Conference manuscript

Authors: Natalia Lipp, Paweł Strojny, Agnieszka Strojny, Sławomir Śpiewak, Jan K. Argasiński, Przemysław Korzeniowski

Research groups: Medical Imaging and Robotics, Computational Neuroscience

Electroencephalographic (EEG) correlates of Visually Induced Motion Sickness (VIMS) in the Virtual Reality (VR) based simulations
Printed Conference manuscript

Authors: Jan K. Argasiński, Natalia Lipp, Szymon Mazurek

Research groups: Computational Neuroscience, Medical Imaging and Robotics

Digital twin simulation development and execution on HPC infrastructures
Printed Conference manuscript

Authors: Marek Kasztelnik, Piotr Nowakowski, Jan Meizner, Maciej Malawski, Adam Nowak, Krzysztof Gądek, Karol Zając, Antonino Amedeo La Mattina, Marian Bubak

Research groups: Extreme-Scale Data and Computing

Designing Personalised Gamification of mHealth Survey Applications
Printed Conference manuscript

Authors: Paulina Adamczyk, Sylwia Marek, Ryszard Pręcikowski, Maciej Kuś, Michal K. Grzeszczyk, Maciej Malawski, Aneta Lisowska

Research groups: Extreme-Scale Data and Computing, Medical Imaging and Robotics

Longitudinal Functional Connectome In Pediatric Concussion: An A-CAP Study
Printed Journal article

Authors: Adrian Onicas, ...

Research groups: Computational Neuroscience