Publications

Displaying items 16-30 of 215 in total
Scaling up your VVUQ Workflows. Practical Automation with EasyVVUQ and Dask on HPC.
Printed Conference abstract

Authors: Karol Zajac, Piotr Nowakowski, Levente Sandor

Research groups: Scientific Programmers

Towards Validated Quantitive Systems Pharmacology Models in In-Silico Medicine
Printed Conference abstract

Authors: Karol Zając, Marek Kasztelnik, Piotr Nowakowski

Research groups: Scientific Programmers, Extreme-Scale Data and Computing

Toolkit for Managing Research Data in Medical Simulations on HPC Infrastructure
Printed Conference abstract

Authors: Taras Zhyhulin, Karol Zając, Piotr Nowakowski, Maciej Malawski, Jan Meizner, Marek Kasztelnik, Piotr Połeć

Research groups: Scientific Programmers

Research Data Sharing Incentivisation Toolkit
Printed Conference abstract

Authors: Taras Zhyhulin, Marek Kasztelnik, Maciej Malawski, Jan Meizner, Piotr Nowakowski, Piotr Połeć, Karol Zając

Research groups: Scientific Programmers

Towards LLM-assisted Execution Planning and Optimizing of Bioinformatics Batch Processing
Accepted Conference manuscript

Authors: Piotr Kica, Michał Orzechowski, Maciej Malawski

Research groups: Extreme-Scale Data and Computing

Gut microbiome and blood biomarkers reveal differential responses to aerobic and anaerobic exercise in collegiate men of diverse training backgrounds
Printed Journal article

Authors: Kinga Humińska-Lisowska, Monika Michałowska-Sawczyn, Tomasz Kosciolek, Paweł P. Łabaj, Andrzej Kochanowicz, Jan Mieszkowski, Patrizia Proia, Paweł Cięszczyk, Kinga Zielińska

Research groups: Structural and Functional Genomics Group

Validation of Various Normalization Methods for Brain Tumor Segmentation: Can Federated Learning Overcome This Heterogeneity?
Printed Conference manuscript

Authors: Jan Fiszer, Dominika Ciupek, Maciej Malawski

Research groups: Extreme-Scale Data and Computing

A NORMATIVE HUMAN GLIOBLASTOMA-CONNECTOME CONSTRUCTED FROM TUMOR-CONNECTED BRAIN REGIONS IMPROVES SURVIVAL RATES ESTIMATION
Printed Conference abstract

Authors: A Janus, J Falcó-Roget, S Lillo, L Politi, J Argasinski, A Cacciola

Research groups: Computer Vision

A CIRCUIT-BASED WHITE MATTER DENSITY NEUROIMAGING BIOMARKER TO STRATIFY, PREDICT, AND INTERPRET SURVIVAL RATES IN HUMAN GLIOBLASTOMA
Printed Conference abstract

Authors: Joan Falcó-Roget, Gianpaolo Antonio Basile, Anna Janus, Sara Lillo, Letterio Salvatore Politi, Jan K Argasinski, Alberto Cacciola

Research groups: Computer Vision

Analysis of Index Access Pattern in STAR RNA-seq Aligner
Printed Conference abstract

Authors: J. Meizner, P. Kica, S. Lichołai, M. Malawski

Research groups: Extreme-Scale Data and Computing

The Use Of Simulation To Support Personalised Management Of Deep Vein Thrombosis And Post-thrombotic Syndrome.
Accepted Conference abstract

Authors: M. Otta, C.S. Lim, J. Tsui, I. Halliday, M. Malawski, A. Narracott

Research groups: Extreme-Scale Data and Computing

Enhancing large-scale cohort simulations through integrated HPC infrastructure and model execution environment
Printed Conference abstract

Authors: Karol Zając, Taras Zhyhulin, Piotr Nowakowski, Jan Meizner, Bartosz Baliś, Konrad Czerepak, Marek Kasztelnik, Piotr Połeć, Sara Oliviero, Maciej Malawski

Research groups: Scientific Programmers, Extreme-Scale Data and Computing

Infrastructure and Practices for Sharing and Disseminating In-Silico Medicine Research Data
Submitted Conference abstract

Authors: Taras Zhyhulin, Karol Zając, Francesca Bottin, Marian Bubak, Giorgio Davico, Marek Kasztelnik, Maciej Malawski, Jan Meizner, Piotr Nowakowski, Piotr Połeć, Goran Stanic

Research groups: Extreme-Scale Data and Computing, Scientific Programmers

Integrating Data Repositories with HPC Resources for Execution of Simulation Models
Printed Conference abstract

Authors: Taras Zhyhulin, Karol Zając, Piotr Nowakowski, Maciej Malawski, Marek Kasztelnik, Piotr Połeć, Marian Bubak

Research groups: Extreme-Scale Data and Computing

Integrating data repositories with HPC resources for execution of VHT models
Printed Conference abstract

Authors: Taras Zhyhulin, Karol Zając, Jan Meizner, Maciej Malawski, Piotr Nowakowski

Research groups: Extreme-Scale Data and Computing